Type 1 diabetes (T1D) is an autoimmune disease resulting from the complex interaction between multiple susceptibility genes, environmental factors and the immune system. Over 40 T1D susceptibility regions have been suggested by recent genome-wide association studies; however, the specific genes and their role in the disease remain elusive. The objective of this study is to identify the susceptibility gene(s) in the 12q13 region and investigate the functional link to the disease pathogenesis. A total of 19 SNPs in the 12q13 region were analyzed by the TaqMan assay for 1,434 T1D patients and 1,865 controls. Thirteen of the SNPs are associated with T1D (best p = 4x10(-11)), thus providing confirmatory evidence for at least one susceptibility gene in this region. To identify candidate genes, expression of six genes in the region was analyzed by real-time RT-PCR for PBMCs from 192 T1D patients and 192 controls. SNP genotypes in the 12q13 region are the main factors that determine ERBB3 mRNA levels in PBMCs. The protective genotypes for T1D are associated with higher ERBB3 mRNA level (p

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realtime rtpcr taqman assay t1d susceptibility erbb3 mrna levels environmental genomewide association 12q13

Ping Yang,Hongjie Wang,Siyang Liu,Yulan Jin,Robert Podolsky,Diane Hopkins,Jin-Xiong She,M V Prasad Linga Reddy,Bruce Bode,John Chip Reed,R Dennis Steed,Stephen W Anderson,Leigh Steed,Yihua Huang,.Genetically dependent ERBB3 expression modulates antigen presenting cell function and type 1 diabetes risk.. 5 (7),.

Ping Yang,Hongjie Wang,Siyang Liu,Yulan Jin,Robert Podolsky,Diane Hopkins,Jin-Xiong She,M V Prasad Linga Reddy,Bruce Bode,John Chip Reed,R Dennis Steed,Stephen W Anderson,Leigh Steed,Yihua Huang,"Genetically dependent ERBB3 expression modulates antigen presenting cell function and type 1 diabetes risk." 5

Ping Yang,Hongjie Wang,Siyang Liu,Yulan Jin,Robert Podolsky,Diane Hopkins,Jin-Xiong She,M V Prasad Linga Reddy,Bruce Bode,John Chip Reed,R Dennis Steed,Stephen W Anderson,Leigh Steed,Yihua Huang,"Genetically dependent ERBB3 expression modulates antigen presenting cell function and type 1 diabetes risk."